27 | β-hairpin | Munoz V, Thompson PA, Hofrichter J, Eaton WA. 1997. Folding dynamics and mechanism of beta-hairpin formation. Nature 390:196-199. |
28 | α-helix | Thompson PA, Eaton WA, Hofrichter J. 1997. Laser temperature jump study of the helix<==>coil kinetics of an alanine peptide interpreted with a 'kinetic zipper' model. Biochemistry 36:9200-9210. |
29 | Trp-cage protein | Qui L, Pabit SA, Roitberg AE, Hagen SJ. 2002. Smaller and faster: the 20-residue Trp-cage protein folds in 4 micros. J. Am. Chem. Soc. 124, 12952-12953. |
30 | BBA5 | Snow CD, Nguyen H., Pande VS, Gruebele M. 2002. Absolute comparison of simulated and experimental protein-folding dynamics. Nature 420:102-106. |
31 | Pin WW domain | Jager M, Nguyen H, Crane JC, Kelly JW, Gruebele M. 2001. The folding mechanism of a beta-sheet: the WW domain. J Mol Biol 311:373-393. |
32 | HP36 | Islam, S.A., Karplus, M. & Weaver, D.L. Application of the diffusion-collision model to the folding of three-helix bundle proteins. J. Mol. Biol. 318, 199-215 (2002). |
33 | WW prototype | Ferguson N, Johnson, CM, Macias M, Oschkinat H, Fersht A, Ultrafast folding of WW domains without structured aromatic clusters in the denatured state., PNAS, 2001, v. 98, p. 13002-13007 |
34 | FBP28 | Ferguson N, Johnson, CV, Macias M, Oschkinat H, Fersht AR. 2001. Ultrafast folding of WW domains without structured aromatic clusters in the denatured state. PNAS 98:13002. |
35 | YAP65 | Ferguson N, Johnson, CM, Macias M, Oschkinat H, Fersht A, Ultrafast folding of WW domains without structured aromatic clusters in the denatured state., PNAS, 2001, v. 98, p. 13002-13007 |
36 | psbd41 | Spector S, Raleigh DP. 1999. Submillisecond folding of the peripheral subunit-binding domain. J Mol Biol 293:763-768. |
37 | Albumin-binding domain of protein PAB | Wang T, Zhu Y, Gai F. 2004. Folding of a three-helix bundle at the folding speed limit. J.Phys.Chem.B 108:3694. |
38 | c-Myb | Gianni S, Guydosh NR, Khan F, Caldas TD, Mayor U, White GWN, DeMarco ML, Daggett V, Fersht AR, Unifying features in protein-folding mechanism., PNAS, 2003, v. 100, p. 13286-13291 |
39 | TRF1 | Gianni S, Guydosh NR, Khan F, Caldas TD, Mayor U, White GWN, DeMarco ML, Daggett V, Fersht AR, Unifying features in protein-folding mechanism., PNAS, 2003, v. 100, p. 13286-13291 |
40 | Src SH3 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
41 | NTL9 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
42 | Protein G | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
43 | Spectrin SH3 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
44 | Fyn SH3 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
45 | Abp1 SH3 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
46 | RAP1 | Gianni S, Guydosh NR, Khan F, Caldas TD, Mayor U, White GWN, DeMarco ML, Daggett V, Fersht AR, Unifying features in protein-folding mechanism., PNAS, 2003, v. 100, p. 13286-13291 |
47 | BdpA | Myers JK, Oas TG, Pre-organized secondary structure as an important determinant of fast protein folding., Nat Struct Biol, 2001, v. 8, p. 552-558 |
48 | Protein L | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
49 | Sso7d | Guerois R, Serrano L, The SH3-fold family: experimental evidence and prediction of variations in the folding pathways., JMB, 2000, v. 304, p. 967-982 |
50 | Ci2 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
51 | CspB | Perl D, Welker C, Schindler T, Schroder K, Marahiel MA, Jaenicke R, Schmid FX, Conservation of rapid two-state folding in mesophilic, thermophilic and hyperthermophilic cold shock proteins., Nat Struct Biol, 1998, v. 5, p. 229-235 |
52 | CspB | Perl D, Welker C, Schindler T, Schroder K, Marahiel MA, Jaenicke R, Schmid FX, Conservation of rapid two-state folding in mesophilic, thermophilic and hyperthermophilic cold shock proteins., Nat Struct Biol, 1998, v. 5, p. 229-235 |
53 | CspB | Perl D, Welker C, Schindler T, Schroder K, Marahiel MA, Jaenicke R, Schmid FX, Conservation of rapid two-state folding in mesophilic, thermophilic and hyperthermophilic cold shock proteins., Nat Struct Biol, 1998, v. 5, p. 229-235 |
54 | EC298 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
55 | PsaE | Ivankov, D.N. and Finkelstein, A.V. (2004) Prediction of protein folding rates from the amino acid sequence-predicted secondary structure. Proc Natl Acad Sci U S A, 101, 8942-8944 |
56 | CspA | Reid KL, Rodriguez HM, Hillier BJ, Gregoret LM, Stability and folding properties of a model beta-sheet protein, Escherichia coli CspA., Protein Sci, 1998, v. 7, p. 470-479 |
57 | ADAh2 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
58 | α3D | Zhu Y, Alonso DO, Maki K, Huang CY, Lahr SJ, Daggett V, Roder H, DeGrado WF, Gai F, Ultrafast folding of alpha-3-D: a de novo designed three-helix bundle protein., PNAS, 2003, v. 100, p. 15486-15491 |
59 | GW1 | Myers JK, Oas TG, Pre-organized secondary structure as an important determinant of fast protein folding., Nat Struct Biol, 2001, v. 8, p. 552-558 |
60 | raf RBD | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
61 | λ-repressor | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
62 | Im9 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
63 | HPr | Van Nuland NA, Meijberg W, Warner J, Forge V, Scheek RM, Robillard GT, Dobson CM, Slow cooperative folding of a small globular protein HPr., Biochemistry, 1998, v. 37, p. 622-637 |
64 | ACBP | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
65 | PI3-SH3 | Guijarro JI, Morton CJ, Plaxco KW, Campbell ID, Dobson CM, Folding kinetics of the SH3 domain of PI3 kinase by real-time NMR combined with optical spectroscopy., JMB, 1998, v. 276, p. 657-667 |
66 | TNfn3 | Clarke J, Hamill SJ, Johnson CM, Folding and stability of a fibronectin type III domain of human tenascin., JMB, 1997, v. 270, p. 771-778 |
67 | 9FNIII | Plaxco KW, Spitzfaden C, Campbell ID, Dobson CM, A comparison of the folding kinetics and thermodynamics of two homologous fibronectin type III modules., JMB, 1997, v. 270, p. 763-770 |
68 | CTL9 | FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
69 | TWIg18’ | Clarke J, Cota E, Fowler SB, Hamill SJ, Folding studies of immunoglobulin-like beta-sandwich proteins suggest that they share a common folding pathway., Structure Fold Des, 1999, v. 7, p. 1145-1153 |
70 | FNfn10 | Plaxco KW, Spitzfaden C, Campbell ID, Dobson CM, A comparison of the folding kinetics and thermodynamics of two homologous fibronectin type III modules., JMB, 1997, v. 270, p. 763-770 |
71 | L23 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
72 | U1A | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
73 | S6 | FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
74 | CT AcP | Taddei N, Chiti F, Paoli P, Fiaschi T, Bucciantini M, Stefani M, Dobson CM, Ramponi G, Thermodynamics and kinetics of folding of common-type acylphosphotase: comparison to the highly homologous muscle isoenzyme., Biochemistry, 1999, v. 38, p. 2135-2142 |
75 | mAcP | FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
76 | SrcSH2 | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
77 | cyt b562 | Wittung-Stafshede P, Lee JC, Winkler JR, Gray HB, Cytochrome b562 folding triggered by electron transfer: approaching the speed limit for formation of a four-helix-bundle protein., PNAS, 1999, v. 96, p. 6587-6590 |
78 | R16 | Scott KA, Batey S, Hooton KA, Clarke J, The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties., JMB, 2004, v. 344, p. 195-205 |
79 | R17 | Scott KA, Batey S, Hooton KA, Clarke J, The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties., JMB, 2004, v. 344, p. 195-205 |
80 | FKBP | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
81 | R15 | Scott KA, Batey S, Hooton KA, Clarke J, The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties., JMB, 2004, v. 344, p. 195-205 |
82 | CheW | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |
83 | CyPA | Ikura T, Hayano T, Takahashi N, Kuwajima K, Fast folding of Escherichia coli cyclophilin A: a hypothesis of a unique hydrophobic core with a phenylalanine cluster., JMB, 2000, v. 297, p. 791-802 |
84 | VlsE | Maxwell KL, Wildes D, Zarrine-Afsar A, De Los Rios MA, Brown AG, Friel CT, Hedberg L, Horng JC, Bona D, Miller EJ, Vallee-Belisle A, Main ER, Bemporad F, Qiu L, Teilum K, Vu ND, Edwards AM, Ruczinski I, Poulsen FM, Kragelund BB, Michnick SW, Chiti F, Bai , Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins., Protein Sci, 2005, v. 14, p. 602-616 |